Papers - YOSHIMOTO Rei
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SAP30BP interacts with RBM17/SPF45 to promote splicing in a subset of human short introns International coauthorship
Kazuhiro Fukumura, Luca Sperotto, Stefanie Seuß, Hyun-Seo Kang, Rei Yoshimoto, Michael Sattler, Akila Mayeda
Cell Reports 2023.12
Joint Work
Research paper (scientific journal)
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4.5SH RNA counteracts deleterious exonization of SINE B1 in mice
Rei Yoshimoto, Yuta Nakayama, Ikuko Nomura, Ikuko Yamamoto, Yumeka Nakagawa, Shigeyuki Tanaka, Misuzu Kurihara, Yu Suzuki, Takehiko Kobayashi, Hiroko Kozuka-Hata, Masaaki Oyama, Mari Mito, Shintaro Iwasaki, Tomohiro Yamazaki, Tetsuro Hirose, Kimi Araki, Shinichi Nakagawa
Molecular Cell 2023.12
Joint Work
Research paper (scientific journal)
Authorship: Lead author Corresponding author
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Histidine N1-position-specific methyltransferase CARNMT1 targets C3H zinc finger proteins and modulates RNA metabolism.
Shimazu T, Yoshimoto R, Kotoshiba K, Suzuki T, Matoba S, Hirose M, Akakabe M, Sohtome Y, Sodeoka M, Ogura A, Dohmae N, Shinkai Y.
Genes & Development 2023.08
Joint Work
Research paper (scientific journal)
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SINE-derived short noncoding RNAs: Their evolutionary origins, molecular mechanisms, and physiological significance
Rei Yoshimoto, Shinichi Nakagawa
Frontiers in RNA Research 2023.08
Joint Work
Research paper (scientific journal)
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The RBM17/SPF45–SAP30BP interaction is essential for splicing in a subset of human short introns
Kazuhiro Fukumura, Luca Sperotto, Stefanie Seuss, Hyun-Seo Kang, Rei Yoshimoto, Michael Sattler, Akila Mayeda
bioRxiv 2023.03
Joint Work
Research paper (scientific journal)
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The production and secretion of tRNA-derived RNA fragments in the corn smut fungus Ustilago maydis
Rei Yoshimoto *, Fumiko Ishida , Miyuki Yamaguchi and Shigeyuki Tanaka*
Frontiers in Fungal Biology 2022.08
Joint Work
Research paper (scientific journal)
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4.5 SH RNA counteracts deleterious exonization of SINE B1 in mice
Rei Yoshimoto1*†, Yuta Nakayama2*, Ikuko Yamamoto2*, Shigeyuki Tanaka1, Misuzu Kurihara2, Yu Suzuki3, Takehiko Kobayashi3, Hiroko Kozuka-Hata4, Masaaki Oyama4, Mari Mito5, Shintaro Iwasaki5,6, Tomohiro Yamazaki7, Tetsuro Hirose7,8, Kimi Araki9, and Shinichi Nakagawa2†
Research Square 2022.08
Joint Work
Research paper (scientific journal)
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A Truncated Form of the p27 Cyclin-Dependent Kinase Inhibitor Translated from Pre-mRNA Causes G2-Phase Arrest
Daisuke Kaida, Takayuki Satoh, Ken Ishida, Rei Yoshimoto, Kanae Komori
Molecular and Cellular Biology 2022.06
Joint Work
Research paper (scientific journal)
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SPF45/RBM17-dependent, but not U2AF-dependent, splicing in a distinct subset of human short introns
Kazuhiro Fukumura, Rei Yoshimoto, Luca Sperotto, Hyun-Seo Kang, Tetsuro Hirose, Kunio Inoue, Michael Sattler, Akila Mayeda
Nature communications12 ( 1 ) 1 - 12 2021.08
Joint Work
Research paper (scientific journal)
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Spliceostatin A interaction with SF3B limits U1 snRNP availability and causes premature cleavage and polyadenylation.
Rei Yoshimoto , Jagat K Chhipi-Shrestha , Tilman Schneider-Poetsch , Masaaki Furuno , A Maxwell Burroughs , Shohei Noma , Harukazu Suzuki , Yoshihide Hayashizaki , Akila Mayeda , Shinichi Nakagawa , Daisuke Kaida , Shintaro Iwasaki , Minoru Yoshida
Cell chemical biology 2021
Joint Work
Research paper (scientific journal)
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ISG20 and nuclear exosome promote destabilization of nascent transcripts for spliceosomal U snRNAs and U1 variants
Takahito Kawamoto Rei Yoshimoto Ichiro Taniguchi Makoto Kitabatake Mutsuhito Ohno
Genes to Cells26 ( 1 ) 18 - 30 2020.11
Joint Work
Research paper (scientific journal)
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Biosynthesis of Circular RNA ciRS-7/CDR1as Is Mediated by Mammalian-wide Interspersed Repeats.
Rei Yoshimoto, Karim Rahimi, Thomas B Hansen, Jørgen Kjems, Akila Mayeda
iScience 2020.07
Joint Work
Research paper (scientific journal)
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A Distinct Subset of Human Short Introns: U2AF Heterodimer Is Replaced by SPF45 (RBM17) as General Splicing Factor
Fukumura K, Yoshimoto R, Hirose T, Inoue K, Mayeda A
bioRxiv 2019.09
Joint Work
Research paper (scientific journal)
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Component of splicing factor SF3b plays a key role in translational control of polyribosomes on the endoplasmic reticulum
Tomonori Ueno, Yuki Taga, Rei Yoshimoto, Akila Mayeda, Shunji Hattori, Kiyoko Ogawa-Goto
Proceedings of the National Academy of Sciences 2019.05
Joint Work
Research paper (scientific journal)
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Global analysis of pre-mRNA subcellular localization following splicing inhibition by spliceostatin A
Rei Yoshimoto, Daisuke Kaida, Masaaki Furuno, A. Maxwell Burroughs, Shohei Noma, Harukazu Suzuki, Yumi Kawamura, Yoshihide Hayashizaki, Akila Mayeda, Minoru Yoshida
RNA 2017.01
Joint Work
Research paper (scientific journal)
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MALAT1 long non-coding RNA in cancer
Rei Yoshimoto, Akila Mayeda, Minoru Yoshida, Shinichi Nakagawa
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2016.01
Joint Work
Research paper (scientific journal)
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Identification of the specific interactors of the human lariat RNA debranching enzyme 1 protein.
So Masaki, Rei Yoshimoto, Daisuke Kaida, Asuka Hata, Takayuki Satoh, Mutsuhito Ohno, Naoyuki Kataoka
Int J Mol Sci 2015.02
Joint Work
Research paper (scientific journal)
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Splicing inhibition induces gene expression through canonical NF‐κB pathway and extracellular signal‐related kinase activation
Khalid Khan, Tilman Schneider-Poetsch, Muhammad Ishfaq, Akihiro Ito, Rei Yoshimoto, Naofumi Mukaida, Minoru Yoshida
FEBS letters 2014.03
Joint Work
Research paper (scientific journal)
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Identification of a novel component C2ORF3 in the lariat–intron complex: lack of C2ORF3 interferes with pre‐m RNA splicing via intron turnover pathway
Rei Yoshimoto, Katsuya Okawa, Minoru Yoshida, Mutsuhito Ohno, Naoyuki Kataoka
Genes to Cells 2014.01
Joint Work
Research paper (scientific journal)
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Detection of pre-mRNA splicing in vitro by an RNA-templated fluorogenic reaction
Yasutsugu Tamura, Kazuhiro Furukawa, Rei Yoshimoto, Yuto Kawai, Minoru Yoshida, Satoshi Tsuneda, Yoshihiro Ito, Hiroshi Abe
Bioorganic & medicinal chemistry letters 2012.12
Joint Work
Research paper (scientific journal)