Papers - INOUE Ryo

Development of a panel for detection of pathogens in xenotransplantation donor pigs.

Otabi H, Miura H, Uryu H, Kobayashi-Harada R, Abe K, Nakano K, Umeyama K, Hasegawa K, Tsukahara T, Nagashima H, Inoue R.

Xenotransplantation   2023.09

Joint Work

Research paper (scientific journal)

Authorship: Corresponding author

The Relationship Between Bacterial Flora in Saliva and Esophageal Mucus and Endoscopic Severity in Patients with Eosinophilic Esophagitis

Sasahira, Momoyo; Matsumoto, Hiroshi; Go, Tei Tei; Yo, Shogen; Monden, Shuzo; Ninomiya, Takahirao; Oosawa, Motoyasu; Handa, Osamu; Umegaki, Eiji; Inoue, Ryo;

International Journal of Molecular Sciences   2025.03

Joint Work

Research paper (scientific journal)

Temporal effects of lascufloxacin on human gut and salivary microbiota: Analysis using next-generation sequencing method

Mukuda, Kengo; Inoue, Ryo; Takata, Miyako; Takazawa, Kenji; Noma, Hisashi; Morishima, So; Oda, Machi; Ma'arif, Athok Shofiudin; Endo, Yusuke; Sunada, Hiroshi;

Journal of Infection and Chemotherapy   2025.01

Joint Work

Research paper (scientific journal)

Characterization of the gut phageome of Japanese patients with ulcerative colitis under endoscopic remission

Otsuki, Akinori; Inoue, Ryo; Imai, Takayuki; Miura, Hiroto; Nishida, Atsushi; Inatomi, Osamu; Andoh, Akira;

Journal of Clinical Biochemistry and Nutrition   2025.01

Joint Work

Research paper (scientific journal)

Partially hydrolyzed guar gum suppresses binge alcohol‐induced liver fat accumulation via gut environment modulation in mice

Morishima, So; Abe, Aya; Okamoto, Saki; Kapoor, Mahendra P; Osumi, Masahide; Oda, Machi; Okubo, Tsutomu; Ozeki, Makoto; Nishio, Masahiro; Inoue, Ryo;

Journal of Gastroenterology and Hepatology   2024.12

Joint Work

Research paper (scientific journal)

Association between gut microbiota and ultra-processed foods consumption among the patients with type 2 diabetes: a cross-sectional study

Ichikawa, Takahiro; Hashimoto, Yoshitaka; Igarashi, Yusuke; Kawai, Sayaka; Kaji, Ayumi; Sakai, Ryosuke; Osaka, Takafumi; Inoue, Ryo; Kashiwagi, Saori; Mizushima, Katsura;

Nutrition & Metabolism   2024.12

Joint Work

Research paper (scientific journal)

Whole-Genome Metagenomic Analysis of Functional Profiles in the Fecal Microbiome of Farmed Sows with Different Reproductive Performances

Miura, Hiroto; Tsukahara, Takamitsu; Inoue, Ryo;

Microorganisms   2024.11

Joint Work

Research paper (scientific journal)

Changes in Microbial Ecosystems and Serum Metabolomics by Diet Supplementation With Enramycin in Weaning Piglets

Umemura, Kana; Miyata, Shiho; Lyu, Guanlin; Suda, Yoshihito; Yoshimoto, Yuto; Terajima, Taiki; Liu, Hong; Kambe, Jun; Makioka‐Itaya, Yuko; Inoue, Ryo;

Journal of Animal Physiology and Animal Nutrition   2024.10

Joint Work

Research paper (scientific journal)

The expression of intestinal Cyp2c55 is regulated by the microbiota and inflammation

Hilman, Adrian; Sato, Tetsu; Wijatniko, Bambang Dwi; Fujimura, So; Nakamura, Katsushi; Miura, Hiroto; Iwatsuki, Ken; Inoue, Ryo; Suzuki, Takuya;

The FASEB Journal   2024.10

Joint Work

Research paper (scientific journal)

Oral supplementation of heat-killed Enterococcus faecalis strain EC-12 relieves gastrointestinal discomfort and alters the gut microecology in academically stressed students

Li, J; Terajima, T; Liu, H; Miyata, S; Kambe, J; Makioka-Itaya, Y; Inoue, R; Yamamoto, Y; Nagaoka, K;

Beneficial Microbes   2024.10

Joint Work

Research paper (scientific journal)

A cross-sectional study on the relationship between nutrient/food intake and gut microbiota in frailty among older community residents: The Kyotango study

Naito, Yuji; Yasuda, Takeshi; Kitae, Hiroaki; Takagi, Tomohisa; Mizushima, Katsura; Koyoma, Teruhide; Inoue, Ryo; Ouchi, Norihiro; Adachi, Atsuo; Kamitani, Tadaaki;

Journal of Clinical Biochemistry and Nutrition   2024.09

Joint Work

Research paper (scientific journal)

Characteristics of Mucosa-Associated Microbiota in Ulcerative Colitis Patients with 5-Aminosalicylic Acid Intolerance

Matsumoto, Hiroshi; Sasahira, Momoyo; Go, Tei Tei; Yo, Shogen; Ninomiya, Takehiro; Osawa, Motoyasu; Handa, Osamu; Umegami, Eiji; Inoue, Ryo; Shiotani, Akiko;

Biomedicines   2024.09

Joint Work

Research paper (scientific journal)

Reduced Abundance of Phocaeicola in Mucosa-associated Microbiota Is Associated with Distal Colorectal Cancer Metastases Possibly through an Altered Local Immune Environment

Ota, Gaku; Inoue, Ryo; Saito, Akira; Kono, Yoshihiko; Kitayama, Joji; Sata, Naohiro; Horie, Hisanaga;

Journal of the Anus, Rectum and Colon   2024.08

Joint Work

Research paper (scientific journal)

Dysfunction of the Murine Liver with Aging and Its Improvement with the Continuous Consumption of Enterococcus faecalis EC-12

Makioka-Itaya, Yuko; Inoue, Ryo; Tsukahara, Takamitsu;

Nutrients   2024.07

Joint Work

Research paper (scientific journal)

Urolithin A-mediated augmentation of intestinal barrier function through elevated secretory mucin synthesis

Yasuda, Takeshi; Takagi, Tomohisa; Asaeda, Kohei; Hashimoto, Hikaru; Kajiwara, Mariko; Azuma, Yuka; Kitae, Hiroaki; Hirai, Yasuko; Mizushima, Katsura; Doi, Toshifumi;

Scientific Reports   2024.07

Joint Work

Research paper (scientific journal)

Supplemental psyllium fiber increases antimicrobial proteins via the tuft cell-ILC2 circuit and type II immune response in the mouse small intestine

Ishii, Yoshiki; Matsunaga, Taiyo; Yasui, Tomoki; Rini, Dina Mustika; Inoue, Ryo; Yamamoto, Yoshinari; Suzuki, Takuya;

Nutraceuticals   2024.06

Joint Work

Research paper (scientific journal)

Causal Association Between the Mucosal and Luminal Microbiotas from the Gastrointestinal Tract of Weaned Piglets Using Bayesian Network

Yoshimura, Shu; Tsukahara, Takamitsu; Takahashi, Toru; Miura, Hiroto; Morishima, So; Kise, Masaaki; Shin, Jiye; Yahara, Yoshihiro; Inoue, Ryo;

Microorganisms   2024.06

Joint Work

Research paper (scientific journal)

Relationship between the components of mare breast milk and foal gut microbiome: shaping gut microbiome development after birth

Mady, Eman A; Osuga, Haruna; Toyama, Haruka; El-Husseiny, Hussein M; Inoue, Ryo; Murase, Harutaka; Yamamoto, Yuki; Nagaoka, Kentaro;

Veterinary Quarterly   2024.06

Joint Work

Research paper (scientific journal)

Investigation of activation-induced markers (AIM) in porcine T cells by flow cytometry

Moorton, Madison; Tng, Priscilla YL; Inoue, Ryo; Netherton, Christopher L; Gerner, Wilhelm; Schmidt, Selma;

Frontiers in Veterinary Science   2024.06

Joint Work

Research paper (scientific journal)

Perturbed maternal microbiota shapes offspring microbiota during early colonization period in mice

Tochitani, Shiro; Tsukahara, Takamitsu; Inoue, Ryo;

Proceedings of the Japan Academy, Series B   2024.05

Joint Work

Research paper (scientific journal)

Alpha-glycosyl isoquercitrin alleviates subchronic social defeat stress-induced depression symptoms by modulating the microbiota-gut-brain axis in mice

Liu, Hong; Li, Junjie; Takahashi, Shogo; Toyoda, Atsushi; Inoue, Ryo; Koyanagi, Mihoko; Hayashi, Shim-mo; Xu, Meiyu; Yamamoto, Yuki; Nagaoka, Kentaro;

Life Sciences   2024.05

Joint Work

Research paper (scientific journal)

Hydrogen peroxide in breast milk is crucial for gut microbiota formation and myelin development in neonatal mice

Kambe, Jun; Usuda, Kento; Inoue, Ryo; Hirayama, Kazuhiko; Ito, Masahiko; Suenaga, Ken; Masukado, Sora; Liu, Hong; Miyata, Shiho; Li, Chunmei;

Gut Microbes   2024.05

Joint Work

Research paper (scientific journal)

Dietary Supplementation of Vitamin B12 to Rats Fed High-Amylose Cornstarch Normalizes Propionate Fermentation in the Colon

Umeda, Tomoki; Yamada, Chihiro; Kawase, Takahiro; TSUkAHARA, Takamitsu; Inoue, Ryo; Hino, Shingo; Nishimura, Naomichi;

Journal of Nutritional Science and Vitaminology   2024.04

Joint Work

Research paper (scientific journal)

Changes in Fecal Microbiota During Estrous Cycle in Healthy Thoroughbred Mares

Li, Junjie; Toyama, Haruka; Matsumoto, Touko; Qasimi, Mohammad Ibrahim; Inoue, Ryo; Murase, Harutaka; Yamamoto, Yuki; Nagaoka, Kentaro;

Journal of Equine Veterinary Science   2024.04

Joint Work

Research paper (scientific journal)

Comparison of the fecal bacterial microbiota in mice, rats, and pigs after oral administration of alpha-glycosyl isoquercitrin

Liu, Hong; Inoue, Ryo; Koyanagi, Mihoko; Hayashi, Shim-mo; Watanabe, Gen; Nagaoka, Kentaro;

The Journal of Toxicological Sciences   2024.03

Joint Work

Research paper (scientific journal)

The gut microbiota associated with pineal gland calcification.

Yasuda T, Matsuoka T, Takagi T, Oya N, Akazawa K, Inoue R, Mizushima K, Ouchi N, Adachi A, Kamitani T, Itoh Y, Naito Y, Yamada K, Matoba S, Narumoto J.

Geriatr Gerontol Int.   2024.01

Joint Work

Research paper (scientific journal)

D-alanine Inhibits Murine Intestinal Inflammation by Suppressing IL-12 and IL-23 Production in Macrophages.

Hashimoto H, Takagi T, Asaeda K, Yasuda T, Kajiwara M, Sugaya T, Mizushima K, Inoue K, Uchiyama K, Kamada K, Higashimura Y, Inoue R, Naito Y, Itoh Y.

J Crohns Colitis.   2024.01

Joint Work

Research paper (scientific journal)

Oral Function and the Oral Microbiome in the Elderly in the Kyotango Area.

Yamamoto Y, Yamamoto T, Miyamoto N, Kinoshita K, Nishikawa S, Adachi T, Takizawa S, Inoue R, Matoba S, Kanamura N.

Dent J (Basel).   2024.01

Joint Work

Research paper (scientific journal)

The gut microbiota associated with pineal gland calcification

Yasuda, Takeshi; Matsuoka, Teruyuki; Takagi, Tomohisa; Oya, Nozomu; Akazawa, Kentaro; Inoue, Ryo; Mizushima, Katsura; Ouchi, Norihiro; Adachi, Atsuo; Kamitani, Tadaaki;

Geriatrics & gerontology international   2024.01

Joint Work

Research paper (scientific journal)

Characteristics of Gastric Mucosa-Associated Microbiota in Patients with Early Gastric Cancer After Successful Helicobacter pylori Eradication.

Nakano T, Dohi O, Takagi T, Naito Y, Fukui H, Miyazaki H, Yasuda T, Yoshida T, Azuma Y, Ishida T, Kitae H, Matsumura S, Takayama S, Mizuno N, Kashiwagi S, Mizushima K, Inoue R, Doi T, Hirose R, Inoue K, Yoshida N, Kamada K, Uchiyama K, Ishikawa T, Konishi H, Itoh Y.

Dig Dis Sci.   2023.12

Joint Work

Research paper (scientific journal)

Reduction of butyric acid-producing bacteria in the ileal mucosa-associated microbiota is associated with the history of abdominal surgery in patients with Crohn’s disease.

Handa O, Miura H, Gu T, Osawa M, Matsumoto H, Umegaki E, Inoue R, Naito Y, Shiotani A.

Redox Rep.   2023.12

Joint Work

Research paper (scientific journal)

Potential Effects of Alpha-Glycosyl Isoquercitrin on Memory by Altering the Gut Microbiota-Blood–Brain Axis in Mice

Liu H, Inoue R, Koyanagi M, Hayashi SM, Nagaoka K.

J Agric Food Chem   2023.11

Joint Work

Research paper (scientific journal)

Effects of liquefied sake lees on growth performance and faecal and blood characteristics in Japanese Black calves.

Katsumata S, Hayashi Y, Oishi K, Tsukahara T, Inoue R, Obata A, Hirooka H, Kumagai H.

Animal.   2023.07

Joint Work

Research paper (scientific journal)

Matcha green tea beverage moderates fatigue and supports resistance training-induced adaptation.

Shigeta M, Aoi W, Morita C, Soga K, Inoue R, Fukushima Y, Kobayashi Y, Kuwahata M.

Nutr J.   2023.07

Joint Work

Research paper (scientific journal)

Reduced abundance of butyric acid-producing bacteria in the ileal mucosa-associated microbiota of ulcerative colitis patients.

Osawa M, Handa O, Fukushima S, Matsumoto H, Umegaki E, Inoue R, Naito Y, Shiotani A.

Journal of Clinical Biochemistry and Nutrition   2023.07

Joint Work

Research paper (scientific journal)

Fucosyllactose Alleviates Early Weaning-Induced Anxiety-Like Behavior, Amygdala Hyperactivity, and Gut Microbiota Changes.

Araki R, Tominaga Y, Inoue R, Kita A, Yabe T.

Biol Pharm Bull.   2023.06

Joint Work

Research paper (scientific journal)

L-amino acid oxidase-1 is involved in the gut-liver axis by regulating 5-aminolevulinic acid production in mice.

Qasimi MI, Fukuzawa S, Suenaga K, Kambe J, Li C, Tomonaga S, Kawase T, Tsukahara T, Hirayama K, Inoue R, Yamamoto Y, Nagaoka K.

J Vet Med Sci   2023.06

Joint Work

Research paper (scientific journal)

A randomized, double-blinded study evaluating effect of matcha green tea on human fecal microbiota.

So Morishima, Yuki Kawada, Yoichi Fukushima, Tomohisa Takagi, Yuji Naito, Ryo Inoue

Journal of clinical biochemistry and nutrition   2023.03

Joint Work

Research paper (scientific journal)

Partially hydrolyzed guar gum is associated with improvement in gut health, sleep, and motivation among healthy subjects.

Aya Abe, So Morishima, Mahendra P Kapoor, Ryo Inoue, Takamitsu Tsukahara, Yuji Naito, Makoto Ozeki

Journal of clinical biochemistry and nutrition   2023.03

Joint Work

Research paper (scientific journal)

Exercise-acclimated microbiota improves skeletal muscle metabolism via circulating bile acid deconjugation.

Wataru Aoi, Ryo Inoue, Katsura Mizushima, Akira Honda, Marie Björnholm, Tomohisa Takagi, Yuji Naito

iScience   2023.03

Joint Work

Research paper (scientific journal)

Partially hydrolyzed guar gum increased colonic mucus layer in mice via succinate-mediated MUC2 production.

Mariko Kajiwara-Kubtota, Kazuhiko Uchiyama, Kohei Asaeda, Reo Kobayashi, Hikaru Hashimoto, Takeshi Yasuda, Satoshi Sugino, Takeshi Sugaya, Yasuko Hirai, Katsura Mizushima, Toshifumi Doi, Ken Inoue, Osamu Dohi, Naohisa Yoshida, Takeshi Ishikawa, Tomohisa Takagi, Hideyuki Konishi, Ryo Inoue, Yoshito Itoh, Yuji Naito

NPJ science of food   2023.03

Joint Work

Research paper (scientific journal)

Effects of Smoking on the Gut Microbiota in Individuals with Type 2 Diabetes Mellitus.

Yuriko Kondo, Yoshitaka Hashimoto, Masahide Hamaguchi, Ayumi Kaji, Ryosuke Sakai, Ryo Inoue, Saori Kashiwagi, Katsura Mizushima, Kazuhiko Uchiyama, Tomohisa Takagi, Yuji Naito, Michiaki Fukui

Nutrients   2022.11

Joint Work

Research paper (scientific journal)

Features of the gut prokaryotic virome of Japanese patients with Crohn's disease.

Takayuki Imai, Ryo Inoue, Atsushi Nishida, Yoshihiro Yokota, So Morishima, Masahiro Kawahara, Hiroyuki Kusada, Hideyuki Tamaki, Akira Andoh

Journal of gastroenterology   2022.08

Joint Work

Research paper (scientific journal)

Effect of Porcine Colostral Exosomes on T Cells in the Peripheral Blood of Suckling Piglets

Hiroto Miura, Itsuki Jimbo, Machi Oda, Michiko Noguchi, Kiyonori Kawasaki, Mayuko Osada-Oka, Takamitsu Tsukahara, Ryo Inoue

Animals   2022.08

Joint Work

Research paper (scientific journal)

Immunocyte Populations Observed from Birth to Weaning in Blood, Spleen and Mesenteric Lymph Nodes of Piglets.

Tomoko Harayama, Takamitsu Tsukahara, Kikuto Fukuta, Machi Oda, Ryo Inoue

Animals   2022.06

Joint Work

Research paper (scientific journal)

Gut Microbiota Associated with Clinical Relapse in Patients with Quiescent Ulcerative Colitis.

Hiroaki Kitae, Tomohisa Takagi, Yuji Naito, Ryo Inoue, Yuka Azuma, Takashi Torii, Katsura Mizushima, Toshifumi Doi, Ken Inoue, Osamu Dohi, Naohisa Yoshida, Kazuhiro Kamada, Kazuhiko Uchiyama, Takeshi Ishikawa, Hideyuki Konishi, Yoshito Itoh

Microorganisms   2022.05

Joint Work

Research paper (scientific journal)

Astaxanthin attenuated the stress-induced intestinal motility disorder via altering the gut microbiota.

Ritsu Yasuda, Kazuhiro Kamada, Takaaki Murakami, Ryo Inoue, Katsura Mizushima, Ryohei Hirose, Ken Inoue, Osamu Dohi, Naohisa Yoshida, Kazuhiro Katada, Kazuhiko Uchiyama, Osamu Handa, Takeshi Ishikawa, Tomohisa Takagi, Hideyuki Konishi, Yuji Naito, Yoshito Itoh

International journal for vitamin and nutrition research   2022.05

Joint Work

Research paper (scientific journal)

Comparison of mucosa-associated microbiota in Crohn’s disease patients with and without anti-tumor necrosis factor-α therapy

Shinya Fukushima, Akiko Shiotani, Hiroshi Matsumoto, Osamu Handa, Yukiko Handa, Motoyasu Osawa, Takahisa Murao, Eiji Umegaki, Mitsuoki Kawano, Ryo Inoue, Yuji Naito

Journal of Clinical Biochemistry and Nutrition   2022.03

Joint Work

Research paper (scientific journal)

Mouse model of weak depression exhibiting suppressed cAMP signal in amygdala, lower lipid catabolism in liver and correlated gut microbiota

Akihito Yasuoka, Kousuke Shimada, Masakatsu Nohara, Asuka Kamei, Fumika Shinozaki, Kaori Kondo2, Ryo Inoue, Takashi Kondo and Keiko Abe

Frontiers in Behavioral Neuroscience   2022.03

Joint Work

Research paper (scientific journal)

Typing of the Gut Microbiota Community in Japanese Subjects

Tomohisa Takagi,Ryo Inoue ,Akira Oshima,Hiroshi Sakazume,Kenta Ogawa,Tomo Tominaga,Yoichi Mihara,Takeshi Sugaya,Katsura Mizushima,Kazuhiko Uchiyama,Yoshito Itoh andYuji Naito

Microorganisms   2022.03

Joint Work

Research paper (scientific journal)

Spatial, temporal and molecular dynamics of swine influenza virus-specific CD8 tissue resident memory T cells

Veronica Martini, Matthew Edmans, Simon Gubbins, Siddharth Jayaraman, Basudev Paudyal, Sophie Morgan, Adam McNee, Théo Morin, Pramila Rijal, Wilhelm Gerner, Andrew K. Sewell, Ryo Inoue, Mick Bailey, Timothy Connelley, Bryan Charleston, Alain Townsend, Peter Beverley & Elma Tchilian

Mucosal Immunology   2022.02

Joint Work

Research paper (scientific journal)

Water‐soluble dietary fiber alleviates cancer‐induced muscle wasting through changes in gut microenvironment in mice

Tomoki Sakakida,Takeshi Ishikawa,Toshifumi Doi,Ryuichi Morita,Yuki Endo,Shinya Matsumura,Takayuki Ota,Juichiro Yoshida,Yasuko Hirai,Katsura Mizushima

Cancer Science   2022.02

Joint Work

Research paper (scientific journal)

Highest concentration of breast-milk-derived exosomes in colostrum.

Motoki Ohta, Shigeki Koshida, Itsuki Jimbo, Machi Oda, Ryo Inoue, Takamitsu Tsukahara, Masaki Terahara, Yoshitaka Nakamura, Yoshihiro Maruo

Pediatrics international   2022.01

Joint Work

Research paper (scientific journal)

Individual variations and effects of birth facilities on the fecal microbiome of laboratory-bred marmosets (Callithrix jacchus) assessed by a longitudinal study.

Yuko Shigeno, Hong Liu, Chie Sano, Ryo Inoue, Kimie Niimi, Kentaro Nagaoka

PloS one   2022

Joint Work

Research paper (scientific journal)

Evaluation of post-colostrum ingestion changes in the protein composition of peripheral blood of newborn piglets: A pilot study.

Ken R Ito, Kiyonori Kawasaki, Hiroto Miura, Takamitsu Tsukahara, Ryo Inoue

Animal science journal   2022

Joint Work

Research paper (scientific journal)

Temporal changes in the fecal microbiome and blood metabolites of early neonatal calves.

Miyu Kojima, Hong Liu, Satoshi Takemoto, Yoshihito Suda, Ryo Inoue, Gen Watanabe, Wanzhu Jin, Kentaro Nagaoka

Frontiers in Animal Science   2022

Joint Work

Research paper (scientific journal)

サルコペニア・フレイルと機能性食品 サルコペニアにおける腸内細菌叢・食習慣の解析

高木 智久, 内藤 裕二, 安田 剛士, 井上 亮, 水島 かつら, 内山 和彦, 的場 聖明

機能性食品と薬理栄養   2021.12

Joint Work

Research paper (scientific journal)

Identification of the core rumen bacterial taxa and their population dynamics during the fattening period in Japanese Black cattle.

Miura, H. Hashimoto, T. Kawanishi, Y. Kawauchi, H. Inoue, R. Shoji, N. Saito, K. Sekiya, M. Saito, Y. Yasuda, J. Yonezaka, C. Endo, T. Kasuya, H. Suzuki, Y. Kobayashi, Y. Koike, S.

Animal Science Journal   2021.12

Joint Work

Research paper (scientific journal)

Supplemental Leuconostoc mesenteroides strain NTM048 attenuates imiquimod-induced psoriasis in mice.

Ogawa, C. Inoue, R. Yonejima, K. Hisa, Y. Yamamoto, T. Suzuki, T.

Journal of Applied Microbiology   2021.12

Joint Work

Research paper (scientific journal)

Effects of partially hydrolyzed guar gum supplementation on the fecal microbiotas of piglets.

Inoue, R. Otabi, H. Yamashita, T. Takizawa, N. Kido, T. Sugiyama, A. Ozeki, M. Abe, A. Tsukahara, T.

Pathogens   2021.11

Joint Work

Research paper (scientific journal)

Dietary intake of yacon roots (Smallanthus sonchifolius) affects gut microbiota and fecal mucin and prevents intestinal inflammation in mice.

Higashimura, Y. Hirabayashi, M. Nishikawa, H. Inoue, R. Nagai, E. Matsumoto, K. Enomoto, T. Mizushima, K. Takagi, T. Naito, Y.

Journal of Clinical Biochemistry and Nutrition   2021.11

Joint Work

Research paper (scientific journal)

The Regional Specificity of Mucosa-Associated Microbiota in Patients with Distal Colorectal Cancer

Kono, Y. Inoue, R. Teratani, T. Tojo, M. Kumagai, Y. Morishima, S. Koinuma, K. Lefor, AK, Kitajima, J. Sata, N. Horie, H.

Digestion   2021.10

Joint Work

Research paper (scientific journal)

Unique Habitual Food Intakes in the Gut Microbiota Cluster Associated with Type 2 Diabetes Mellitus.

Kondo, Y. Hashimotom, Y. Hamaguchi, M. Ando, S. Kaji, Y. Sakai, R. Inoue, R. Kashiwagi, S. Mizushima, K. Uchiyama, K. Takagi, T. Naito, Y. Fukui, M.

Nutrients   2021.10

Joint Work

Research paper (scientific journal)

【高齢者における消化器診療】腸内細菌と長寿

内藤 裕二, 高木 智久, 井上 亮, 的場 聖明

内科   2021.10

Joint Work

Research paper (scientific journal)

Combined Therapy of Probiotic Supplementation and Rehydration Improves Blood Dehydration Parameters and Decreases Mortality of Neonatal Piglets Naturally Infected with Porcine Epidemic Diarrhea Virus: A Clinical Trial.

Inatomi, T. Tsukahara, T. Romero-Perez, A, G. Inoue, R. 

Journal of Clinical Biochemistry and Nutrition   2021.10

Joint Work

Research paper (scientific journal)

Effects of Soy Isoflavones, Resistant Starch and Antibiotics on Polycystic Ovary Syndrome (PCOS)-Like Features in Letrozole-Treated Rats.

Liyanage, G, G. Inoue, R. Fujitani, M. Ishijima, M. Shibutani, T. Abe, K. Kishida, T. Okada, S.

Nutrients   2021.10

Joint Work

Research paper (scientific journal)

Altered Fecal Microbiotas and Organic Acid Concentrations Indicate Possible Gut Dysbiosis in University Rugby Players: An Observational Study.

Morishima, S. Oda, N. Ikeda, H. Segawa, T. Oda, M. Tsukahara, T. Kawase, Y. Takagi, T. Naito, Y. Fujibayashi, M. Inoue, R. 

Microorganisms   2021.08

Joint Work

Research paper (scientific journal)

Chronological changes of serum exosome in preterm infants: A prospective study.

Ohta, M. Koshida, S. Jimbo, I. Oda, M. Inoue, R. Tsukahara, T. Terahara, M. Yanagi, T. Nakahara, S. Shibata, M. Tsutsui, H. Yoshida, D. Furukawa, O. Maruo, Y.

Pediatrics International   2021.07

Joint Work

Research paper (scientific journal)

【肥満と消化管】肥満と腸内細菌 腸内環境からみた下部消化管疾患

内藤 裕二, 高木 智久, 井上 亮

日本消化器病学会雑誌   2021.06

Joint Work

Research paper (scientific journal)

人の一生と腸内フローラ:乳児、成人、高齢者における腸内フローラと健康 京丹後長寿コホート研究と腸内細菌叢

内藤 裕二, 高木 智久, 井上 亮

腸内細菌学雑誌   2021.04

Joint Work

Research paper (scientific journal)

京都府京丹後地域における高齢者の身体機能と腸内細菌叢

安田 剛士, 高木 智久, 橋本 光, 菅谷 武史, 梶原 真理子, 東 祐圭, 北江 博晃, 鳥井 貴司, 鎌田 和浩, 内山 和彦, 井上 亮, 内藤 裕二, 伊藤 義人

腸内細菌学雑誌   2021.04

Joint Work

Research paper (scientific journal)

Fusobacterium nucleatum impedes remission of colitis in a mouse model.

Yamashita, T. Tai, S. Tsukahara, T. Inoue, R.

Bioscience Biotechnology and Biochemistry   2021.03

Joint Work

Research paper (scientific journal)

Mucosa-asscociated microbiota in patients with irritable bowel syndrome: a comparison of subtypes

Matsumoto, H. Shiotani, A. Katsumata, R. Fukushima, S. Handa, Y. Osawa, M. Murao, T. Handa, O. Umegaki, E. Inoue, R. Naito, Y.

Digestion   2020.12

Joint Work

Research paper (scientific journal)

Intensive, prolonged exercise seemingly causes gut dysbiosis in female endurance runners.

Morishima, S. Aoi, W. Kawamura, A. Kawase, T. Takagi, T. Naito, Y. Tsukahara, T. Inoue, R.

Journal of Clinical Biochemistry and Nutrition   2020.10

Joint Work

Research paper (scientific journal)

Preliminary investigation of the use of dietary supplementation with probiotic Bacillus subtilis strain QST713 shows that it attenuates antimicrobial-induced dysbiosis in weaned piglets.

Tsukahara, T. Kimura, Y. Inoue, R. Iwata, T.

Animal Science Journal   2020.10

Joint Work

Research paper (scientific journal)

離乳期における仔豚の小腸絨毛と５−アミノレブリン酸

井上亮

MPアグロジャーナル   2020.10

Single Work

Research paper (other academic)

Mucosa-associated gut microbiome in Japanese patients with functional constipation

Sugitani, Y. Inoue, R. Inatomi, O. Nishida, A. Morishima, S. Imai, T. Kawahara, M. Naito, Y. Andoh, A

Journal of Clinical Biochemistry and Nutrition   2020.09

Joint Work

Research paper (scientific journal)

Changes in the Gut Microbiota are Associated with Hypertension, Hyperlipidemia, and Type 2 Diabetes Mellitus in Japanese Subjects.

Takagi, T. Naito, Y. Kashiwagi, S. Uchiyama, K. Mizushima, K. Kamada, K. Ishikawa, T. Inoue, R. Okuda, K. Tsujimoto, Y. Ohnogi, H. Itoh, Y.

Nutrients   2020.09

Joint Work

Research paper (scientific journal)

Comparison of Productivity and Fecal Microbiotas of Sows in Commercial Farms.

Uryu, H. Tsukahara, T. Ishikawa, H. Oi, M. Otake, S. Yamane, I. Inoue, R.

Microorganisms   2020.09

Joint Work

Research paper (scientific journal)

Characterizing the gut microbiota in females with infertility and preliminary results of a water-soluble dietary fiber intervention study.

Komiya, S. Naito, Y. Okada, H. Matsuo, Y. Hirota, K. Takagi, T. Mizushima, K. Inoue, R. Abe, A. Morimoto, Y.

Journal of Clinical Biochemistry and Nutrition   2020.06

Joint Work

Research paper (scientific journal)

Epigallocatechin-3-gallate (EGCG) attenuates non-alcoholic fatty liver disease via modulating the interaction between gut microbiota and bile acids.

Naito, Y. Ushiroda, C. Mizushima, K. Inoue, R. Yasukawa, Z. Abe, A. Takagi, T.

Journal of Clinical Biochemistry and Nutrition   2020.06

Joint Work

Research paper (scientific journal)

Intake of sucrose affects gut dysbiosis in patients with type 2 diabetes.

Hashimoto, Y. Hamaguchi, M. Kaji, A. Sakai, R. Osaka, T. Inoue, R. Kashiwagi, S. Mizushima, K. Uchiyama, K. Takagi, T. Naito, Y. Fukui, M.

Journal of diabetes investigation   2020.05

Joint Work

Research paper (scientific journal)

Analysis of infant microbiota composition and the relationship with breast milk components in the Asian elephant (Elephas maximus) at the Zoo.

Kambe, J. Sasaki, Y. Inoue, R. Tomonaga, S. Kinjo, T. Watanabe, G. Jin, W. Nagaoka, K.

Journal of Veterinary Medical Science   2020.04

Joint Work

Research paper (scientific journal)

Comparison of the Fecal Microbiota of Two Monogastric Herbivorous and Five Omnivorous Mammals.

Kobayashi, R. Nagaoka, K. Nishimura, N. Koike, S. Takahashi, E. Niimi, K. Murase, H. Kinjo, T. Tsukahara, T. Inoue, R.

Animal Science Journal   2020.04

Joint Work

Research paper (scientific journal)

Elemental diet induces alterations of the gut microbial community in mice.

Andoh, A. Inoue, R. Kawada, Y. Morishima, S. Inatomi, O. Ohno, M. Bamba, S. Nishida, A. Kawahara, M. Naito, Y

Journal of Clinical Biochemistry and Nutrition   2020

Joint Work

Research paper (scientific journal)

Gut microbiota differences in elderly subjects between rural city Kyotango and urban city Kyoto: an age-gender-matched study

Naito, Y. Takagi, T. Inoue, R. Kashiwagi, S. Mazushima, K. Tsuchiya, S. Itoh, Y. Okuda, K. Tsujimoto, Y. Adachi, A. Maruyama, N. Oda, Y. Matoba, S

Journal of Clinical Biochemistry and Nutrition   2020

Joint Work

Research paper (scientific journal)

Analysis of gut microbiota in patients with cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL).

6) Matsuura, J. Inoue, R. Takagi, T. Wada, S. Watanabe, A. Koizumi, T. Mukai, M. Mizuta, I. Naito, Y. Mizuno, T

Journal of Clinical Biochemistry and Nutrition   2020

Joint Work

Research paper (scientific journal)

Higher Levels of Streptococcus in Upper Gastrointestinal Mucosa Associated with Symptoms in Patients with Functional Dyspepsia

Fukui, A. Takagi, T. Naito, Y. Inoue, R. Kashiwagi, S. Mizushima, K. Inada, Y. Inoue, K. Harusato, A. Dohi, O. Okayama, T. Katada, K. Kamada, K. Uchiyama, K. Ishikawa, T. Handa, O. Itoh, Y. Nakagawa, M

Digestion   2020

Joint Work

Research paper (scientific journal)

Heat-killed Enterococcus fecalis (EC-12) supplement alters the expression of neurotransmitter receptor genes in the prefrontal cortex and alleviates anxiety-like behavior in mice

Kambe, J. Watcharin, S. Makioka-Itaya, Y. Inoue, R. Watanabe, G. Yamaguchi, H. Nagaoka, K.

Neuroscience letters   2020

Joint Work

Research paper (scientific journal)

Dysregulation of oxytocin receptor (OXTR) gene in Williams syndrome

Kimura, R. Tomiwa, K. Inoue, R. Nakata, M. Awaya, T. Kato, T. Okazaki, S. Heike, T. Hagiwara, M

Pysconeuroendocrinology,   2020

Joint Work

Research paper (scientific journal)

Improvement of Psoriasis by Alteration of the Gut Environment by Oral Administration of Fucoidan from Cladosiphon Okamuranus

Takahashi, M. Takahashi, K. Abe, S. Yamada, K. Suzuki, M. Masahisa, M. Endo, M. Abe, K. Inoue, R. Hoshi, H

Marine Drugs   2020

Joint Work

Research paper (scientific journal)

Comparison of the Fecal Microbiota of Two Monogastric Herbivorous and Five Omnivorous Mammals

1)      Kobayashi, R. Nagaoka, K. Nishimura, N. Koike, S. Takahashi, E. Niimi, K. Murase, H. Kinjo, T. Tsukahara, T. Inoue, R.

Animal Science Journal   2020

Joint Work

Research paper (scientific journal)

Green tea polyphenol (epigallocatechin-3-gallate) improves gut dysbiosis and serum bile acids dysregulation in high-fat diet-fed mice

Ushiroda, C. Naito, Y. Takagi, T. Uchiyama, K. Mizushima, K. Higashimura, Y. Yasukawa, Z. Okubo, T. Inoue, R. Honda, A. Matsuzaki, Y. Itoh, Y

Journal of Clinical Biochemistry and Nutrition   2019

Joint Work

Research paper (scientific journal)

Poor Bifidobacterial Colonization Is Associated with Late Provision of Colostrum and Improved with Probiotic Supplementation in Low Birth Weight Infants.

Tanaka, K. Nakamura, Y. Terahara, M. Yanagi, T. Nakahara, S. Furukawa, O. Tsutsui, H. Inoue, R. Tsukahara, T. Koshida, S.

Nutrients   2019

Joint Work

Research paper (scientific journal)

Exploratory investigation of the anti-inflammatory effects of RNase A-treated Enterococcus faecalis strain EC-12.

Tamaki, R. Takahashi, M. Tai, S. Makioka-Itaya, M. Ijichi, T. Inoue, R.

Bioscience Biotechnology and Biochemistry,   2019

Joint Work

Research paper (scientific journal)

Effect of Repeated Consumption of Partially Hydrolyzed Guar Gum on Fecal Characteristics and Gut Microbiota: A Randomized, Double-Blind, Placebo-Controlled, and Parallel-Group Clinical Trial.

Yasukawa, Z. Inoue, R. Ozeki, M. Okubo, T. Takagi, T. Honda, A. Naito, Y

Nutrients   2019

Joint Work

Research paper (scientific journal)

Ovarian progesterone suppresses depression and anxiety-like behaviors by increasing the Lactobacillus population of gut microbiota in ovariectomized mice.

Sovijit, NW. Sovijit, EW. Pu, S. Usuda, K. Inoue, R. Watanabe, G. Yamaguchi, H. Nagaoka, K

Neuroscience Research   2019

Joint Work

Research paper (scientific journal)

保存方法及びDNA抽出方法が日本人成人の糞便細菌叢構成に与える影響

Kawada,Y. Naito, Y. Andoh,A. Ozeki,M. Inoue, R.

Journal of Clinical Biochemistry and Nutrition   2018.12

Joint Work

Research paper (scientific journal)

グアガム由来水溶性食物繊維の摂取は便秘症自閉症スペクトラム障害児童の便秘と腸内細菌叢異常を改善し、興奮性の行動異常をも改善する。

(Inoue, R. Sakaue, Y. Kawada, Y. Tamaki, R. Yasukawa, Z, Ozeki, M. Ueba, S. Sawai, C. Nonomura, K. Tsukahara, T. Naito, Y.

Journal of Clinical   2018.12

Joint Work

Research paper (scientific journal)

日本人被験者における、口腔から直腸までの粘膜付着細菌叢の分布

Kashiwagi, S. Naito, Y. Inoue, R. Takagi, T. Nakano, T. Inada, Y. Fukui, A. Katada, K. Uchiyama, K. Itoh, Y.

Digestion   2018.12

Joint Work

Research paper (scientific journal)

The immunological response of pigs against human cell, included issues such as the production of natural antibodies in newborns

Sakai, R. Watanabe, M. Akira, M. Lo, P. Wang, HT. Matsuura, R. Kodama, T. Eguchi, H. Ueno, T. Inoue, R. Nagashima, H. Okuyama, H. Miyagawa, S.

Transplantaton Proceedings   2018.11

Joint Work

Research paper (scientific journal)

日本人の炎症性腸疾患患者における真菌叢異常の特定

Imai, T. Inoue, R. Kawada, Y. Morita, Y. Inatomi, O. Nishida, A. Bamba, S. Kawahara, M. Andoh, A.

Journal of Gastroenterology   2018.11

Joint Work

Research paper (scientific journal)

マウス腸内細菌叢の発達は授乳中にアミノ酸代謝から産生される過酸化水素の影響を受ける。

Shigeno, Y. Zhang, H. Banno, T. Usuda, K. Nochi, T. Inoue, R. Watanabe, G. Jin, W. Benno, Y. Nagaoka, K.

The FASEB Journal   2018.11

Joint Work

Research paper (scientific journal)

ほ乳から離乳期にかけての，ブタ大腸発酵によって生産された短鎖脂肪酸の生産・吸収と血液内分布

(Nakatani,M. Inoue, R. Tomonaga, S. Fukuta, K. Tsukahara, T.

Nutrients   2018.09

Joint Work

Research paper (scientific journal)

プロバイオティクスはワクチン接種をしていない母豚の豚流行性下痢感染時の生産性を改善する。

Tsukahara,T. Inatomi,T. Otomaru,K. Amatatsu,M. Romero-Perez,GA. Inoue,R.)

Animal Science Journal   2018.08

Joint Work

Research paper (scientific journal)

健常日本人における、腸内細菌叢の年齢、性別、糞便性状による違い。

Takagi, T. Naito, Y. Inoue, R. Kashiwagi, S. Uchiyama, K. Mizushima, K. Tsuchiya, S. Dohi, O. Yoshida, N. Kamada, K. Ishikawa, T. Handa, O. Konishi, H. Okuda, K. Tsujimoto, Y. Ohnogi, H. Itoh, Y.

Journal of Gastroenterology   2018.06

Joint Work

Research paper (scientific journal)

抗ブタCD69モノクローナル抗体の作製とそれを用いたフローサイトメーターによる細胞性免疫の早期活性化の評価

(Hayashi, Y. Okutani, M. Ogawa, S. Tsukahara, T. Inoue, R.

Animal Science Journal   2018.05

Joint Work

Research paper (scientific journal)

水素飽和アルカリ電解水がマウス腸内環境に与える影響。

(Higashimura,Y. Baba,Y. Inoue,R. Takagi,T. Uchiyama,K. Mizushima,K. Hirai,Y. Ushiroda,C. Tanaka,Y. Naito,Y.

Medical Gas Research   2018.04

Joint Work

Research paper (scientific journal)

Bacillus amyloliquefaciens TOA5001株の飼料添加は腸内細菌叢を変化させることで、ブロイラーのコクシジウム症を抑制する。

Tsukahara,T. Inoue,R. Nakayama,K. Inatomi,T.

Animal Science Journal   2018.04

Joint Work

Research paper (scientific journal)

Bifidobacterium longum BR-108株の経口投与は菌体の生死に関わらず、マウスの免疫系を刺激し、腸内細菌叢を変化させる。

Makioka, Y. Tsukahara, T. Ijichi, T. Inoue, R.

Bioscience Biotechnology and Biochemistry   2018.03

Joint Work

Research paper (scientific journal)

回腸粘膜のプロバイオティック乳酸菌に対する応答は哺乳マウスと成熟マウスで顕著に異なる。

Inoue, R. Fujiwara, S. Tsukahara, T.

Bioscience Biotechnology and Biochemistry   2018.02

Joint Work

Research paper (scientific journal)

プロトンポンプ抑制剤の長期使用が腸内細菌叢に与える影響。年齢、性別一致の症例管理研究。

Takagi,T. Inoue,R. Kashiwagi, S. Uchiyama, K. Okayama, T. Dohi, W. Kamada, K. Ishikawa, T. Handa, O. Konishi, H. Itoh, Y. Tsujimoto, Y. Onogi, H. Naito, Y.

Journal of Clinical Biochemistry and Nutrition   2018.01

Joint Work

Research paper (scientific journal)

高水素産生型腸内細菌叢の移植は高アミローストウモロコシデンプンを給与したレシピエントラットの大腸内水素産生を誘導する

Nishimura, N. Tanabe, H. Komori, E. Sasaki, Y. Inoue, R. Yamamoto, T.

Nutrients   2018.01

Joint Work

Research paper (scientific journal)

食物アレルギー児における腸内細菌叢異常の予備的検討

Inoue,R. Sawai, T. Sawai, C. Nakatani, M. Romero-Pérez, GA. Ozeki, M. Nonomura, K. Tsukahara, T.

Bioscience Biotechnology and Biochemistry   2017.12

Joint Work

Research paper (scientific journal)

ブタ末梢血中のCD4/CD8二重陽性細胞の遺伝子発現プロファイル。

Okutani, M. Tsukahara T. Kato, Y. Fukuta, K. Inoue, R.

Animal Science Journal   2017.12

Joint Work

Research paper (scientific journal)

プロバイオティクスの飼料添加は豚流行性下痢に感染した日本農場のワクチン接種母豚における生産性を改善する。

Frontiers in Immunology

Frontiers in Immunology   2017.12

Joint Work

Research paper (scientific journal)

16S rRNAメタゲノム解析データからの機能予測は、日本人の2型糖尿病患者における腸内細菌叢異常をより堅牢に評価することができる。

Inoue,R. Ohue-Kitano R. Tsukahara, T. Tanaka, M. Masuda, S. Inoue, T. Yamakage, H. Kusakabe, T. Hasegawa, K. Shimatsu, A. Satoh-Asahara, N.

Journal of Clinical Biochemistry and Nutrition   2017.11

Joint Work

Research paper (scientific journal)

アガロオリゴ糖はマウスにおいて腸内細菌叢を変化させ、脂肪蓄積を調整する

Higashimura, Y. Baba, Y. Inoue, R. Takagi, T. Mizushima, K. Ohnogi, H. Honda, A. Matsuzaki, Y. Niato, Y.

Journal of Nutritional Science and Vitaminology   2017.10

Joint Work

Research paper (scientific journal)

ヒト腸内常在菌Roseburia hominisは免疫系を調節・刺激する。

Patterson, A. Mulder, I. Travis, A. Lan, A. Gaboriau-routhiau, V. Cerf-bensussan, N. Garden, K. Logan, E. Delday, M. Coutts, A. Monnais, E. Ferraria, V. Inoue, R. Grant, G. Aminov, R.

Frontiers in Immunology   2017.09

Joint Work

Research paper (scientific journal)

ピロリ菌陰性の健常者におけるカリウム競合胃酸抑制剤の腸内細菌叢に対する影響。

Otuska, T. Sugimoto, M, Inoue, R. Ohno, M. Ban, H, Nishida, A. Inatomi, O. Takahashi, S. Naito, Y. Andoh, A.

Gut   2017.09

Joint Work

Research paper (scientific journal)

内視鏡ブラシで採取した検体の解析による、炎症性腸疾患における粘膜関連細菌叢の異常の検出

Nishino, K. Nishida, A. Inoue, R. Kawada, Y. Ohno, M. Sakai, S. Inatomi, O. Bamba, S. Sugimono, M. Kawahara, M. Naito, Y. Andoh, A.

Journal of Gastroenterology   2017.08

Joint Work

Research paper (scientific journal)

トル様受容体2と4のマウス小腸における生後発現変化

Inoue, R. Yajima, T. Tsukahara, T.

Bioscience Biotechnology and Biochemistry   2017.02

Joint Work

Research paper (scientific journal)

生後24時間の初乳摂取がブタの初期免疫系の発達に与える影響

Ogawa, S. Tsukahara, T. Imaoka, T. Nakanishi, N. Ushida, K. Inoue, R.

Animal Science Journal   2016.12

Joint Work

Research paper (scientific journal)

自閉症児における腸内細菌叢と白血球中遺伝子発現との関係性についての予備的検討。

Inoue, R. Sakaue, Y. Sawai, C. Sawai, T. Ozeki, M. Romero-Pérez, GA, Tsukahara, T.

Bioscience Biotechnology and Biochemistry   2016.12

Joint Work

Research paper (scientific journal)

ブタ初乳中T細胞と血中T細胞の遺伝子発現プロファイルの比較。

Ogawa, S. Okutani, M. Tsukahara, T. Nakanishi, N. Kato, Y. Fukuta, K. Romero-Pérez, GA. Ushida, K. Inoue, R

American Journal of Veterinary Research   2016.09

Joint Work

Research paper (scientific journal)

サラシア抽出物の経口投与はNK活性を高めることで、マウス肺に対するインフルエンザH1N1の症状を緩和する。

Romero-Pérez, GA, Egashira, M. Tsuruta, T. Oda, Y. Ueda, F. Tsukahara, T. Tsukamoto, T. Inoue, R.

Frontiers in Immunology   2016.03

Joint Work

Research paper (scientific journal)

ブタ小腸における絨毛高と二糖分解酵素活性に与える離乳の影響。

Tsukahara, T. Inoue, R. Nakatani, M. Fukuta, K. Kishino, E. Ito, T. Ushida, K.

Animal Science Journal   2016.01

Joint Work

Research paper (scientific journal)

離乳はブタ回腸における遺伝子発現プロファイルとパイエル板の発達に顕著な影響を与える

Inoue, R. Tsukahara, T. Nakatani, M. Okutani, M. Nishibayashi, R. Ogawa, S. Harayama, T. Nagino, T. Hatanaka, H. Fukuta, K. Romero-Pérez, GA. Ushida, K. and Kelly, D

Frontiers in Immunology   2015.12

Joint Work

Research paper (scientific journal)